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Example of BB3 data

Entity categorization (BB-cat)

.txt

[The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].


.a1

T1       Title 0 104     [The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].

T2       Bacteria 22 30           Serratia

T3       Habitat 39 68            Hospital S. Camillo De Lellis

.a2

N1       NCBI_Taxonomy Annotation:T2 Referent:613

N2       OntoBiotope Annotation:T3 Referent:OBT:001835


OntoBiotope

[Term]

id: OBT:001835

name: hospital

synonym: "hospital environment" RELATED []

is_a: OBT:001423 ! medical center

NCBI Taxonomy, names.dmp

613     |           Serratia          |                       |           scientific name          |

Entity and event extraction (BB-event)

.txt

[The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].


.a1

 T1       Title 0 104     [The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].

T2       Bacteria 22 30           Serratia

T3       Habitat 39 68            Hospital S. Camillo De Lellis

T4       Geographical 72 76  Roma

T5       Geographical 78 83  Italy


.a2

R1       Lives_In Bacteria:T2 Location:T4

R2       Lives_In Bacteria:T2 Location:T5

R3       Lives_In Bacteria:T2 Location:T3

Knowledge base extraction (BB-kb)

.txt

[The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].


 .a1

T1       Title 0 104     [The infections from "Serratia" in the Hospital S. Camillo De Lellis of Roma (Italy) (author's transl)].

T2       Bacteria 22 30           Serratia

T3       Habitat 39 68            Hospital S. Camillo De Lellis

 

.a2

N1       NCBI_Taxonomy Annotation:T2 Referent:613

N2       OntoBiotope Annotation:T3 Referent:OBT:001835

R3       Lives_In Bacteria:T2 Location:T3


OntoBiotope

[Term]

id: OBT:001835

name: hospital

synonym: "hospital environment" RELATED []

is_a: OBT:001423 ! medical center


NCBI Taxonomy, names.dmp

613     |           Serratia          |                       |           scientific name          |